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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs35109143 chr8:71577900 C/T XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs35115527 chr8:71643009 T/C XKR9 chr8:71581600-71702606:+ 0.73 6.85 8.65E-9 Box Plot
ACC rs35122864 chr2:61677235 C/CA C2orf74 chr2:61372203-61391964:+ 0.59 5.61 7.81E-7 Box Plot
ACC rs35174746 chr7:64966064 G/GA INTS4L1 chr7:64601603-64694600:+ 0.7 5.27 2.69E-6 Box Plot
ACC rs35185140 chr7:64421467 T/TA INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs35190368 chr7:97481248 A/T TECPR1 chr7:97843936-97881563:- 0.79 5.17 3.75E-6 Box Plot
ACC rs35207116 chr8:71708971 G/A XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs35214141 chr8:71574564 T/C XKR9 chr8:71581600-71702606:+ 0.65 6.66 1.71E-8 Box Plot
ACC rs35224125 chr14:64398621 A/C SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs35233766 chr8:71710223 A/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs35244712 chr14:74292444 TAA/T LIN52 chr14:74551499-74667938:+ 0.5 5.27 2.65E-6 Box Plot
ACC rs35292793 chr17:62992632 T/C AMZ2P1 chr17:62962668-62971694:- 0.91 5.69 5.92E-7 Box Plot
ACC rs35295900 chr8:71642061 G/C XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs35304156 chr5:96319015 CAT/C ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs35314288 chr1:113122778 G/GT ST7L chr1:113066140-113163447:- 0.73 5.14 4.25E-6 Box Plot